Co-Translational mRNA Decay Data Across 23 Species

773 uniformly processed 5PSeq datasets provide insights into ribosome dynamics and mRNA decay across 23 species in bacteria and Ascomycota. The resource integrates normalized counts and structured metadata for exploring codon, amino acid, and transcript-level phenomena.

Use Cases

• Analyze codon optimality patterns using normalized counts of ribosome protected fragments.
• Investigate ribosome stall and collision features across the 23 species covered.
• Study the crosstalk between mRNA decay and ribosome dynamics at the transcript level.
• Compare degradome sequencing (5PSeq) signals between bacterial and Ascomycota species.

Strengths

• 773 uniformly processed datasets enable cross-species comparisons.
• Data spans 23 distinct species across two major biological groups.
• Includes normalized counts and structured metadata for systematic analysis.

Limitations

• The total data volume is small at 551.7 KB, limiting the scope of individual analyses.
• The dataset is a processed summary resource, not raw sequencing reads.
• Species coverage is focused on bacteria and Ascomycota, excluding other taxonomic groups.

Provenance

Source

figshare, author Irene Stevens.

Collection Method

Uniform processing of degradome sequencing (5PSeq) datasets.

Time Range

null

Freshness

Last updated March 2026.

Geography

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