69 Hypothetical Fungal Proteins from Microbotryum intermedium Predicted Proteome

69 hypothetical proteins from the predicted proteome of the fungal pathogen Microbotryum intermedium 1389 BM 12 12. The dataset, created by Michael Perlin, contains predicted amino acid sequences and JGI Gene IDs for proteins lacking conserved domains, identified from an initial pool of 296 predicted small secreted proteins. It was last updated on May 31, 2026.

Use Cases

• Identifying novel fungal effector candidates based on the small secreted protein (SSP) feature.
• Training protein function prediction models on sequences annotated as 'hypothetical'.
• Comparative genomics analysis of the Microbotryum genus using the provided JGI Gene IDs.
• Studying the evolution of secreted proteins in plant pathogenic fungi.

Strengths

• Focuses on a specific, defined subset of 69 proteins from an initial set of 296 predicted SSPs.
• Includes predicted amino acid sequences and JGI Gene IDs for traceability to source annotations.
• Released under a permissive CC-BY-4.0 license, allowing for broad reuse.

Limitations

• Dataset is very small at 15.8 KB, limiting statistical power for machine learning.
• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.

Provenance

Source

JGI annotations of the Microbotryum intermedium 1389 BM 12 12 predicted proteome.

Collection Method

Parsed from proteins remaining as small secreted proteins (SSPs) after a pipeline that included Phobius prediction.

Freshness

Last updated 2026-05-31 17:10:25; freshness should be verified.