GTEx QC Metrics for Allelic Imbalance Analysis from Single-Nucleus RNA-seq

17.7 KB Excel file contains QC metrics reported by STARsolo and an ASE pipeline for GTEx samples. Sean K. Simmons authored this supplementary table for allelic imbalance analysis research, last updated in May 2026.

Use Cases

• Evaluate pipeline performance based on QC metrics reported by STARsolo and ASE pipeline
• Associate QC metrics with allelic imbalance analysis outcomes mentioned in the description
• Benchmark GTEx sample quality for single-nucleus RNA-seq experiments

Strengths

• 17.7 KB file size indicates a concise, focused dataset
• QC metrics are reported by two established tools: STARsolo and an ASE pipeline

Limitations

• Row count is unknown, which may limit suitability assessment
• Column-level documentation is absent; field semantics must be inferred after download

Provenance

Source

figshare

Collection Method

Likely generated as supplementary material for a computational genomics research paper.

Freshness

Last updated 2026-05-19 04:18:10; freshness should be verified