Chicken Granulosa Cell Multi-Omics Data for Follicle Selection Study

Additional file 1 from a multi-omics study on chicken follicle selection, containing 11 Excel tables with primer sequences, alignment statistics, peak counts, and differential gene expression results. Dandan Li published this 6.6 MB dataset under a CC-BY-4.0 license on figshare in April 2026. The tables likely contain results from integrated ATAC-seq and mRNA-seq analyses performed on granulosa cells.

Use Cases

• Validate primer sequences for PCR experiments based on the primer table.
• Assess sequencing data quality and alignment efficiency based on the alignment statistics tables.
• Identify differentially expressed genes (DEGs) specific to pre- and post-selection granulosa cells.
• Analyze concordance between chromatin accessibility and gene expression changes using the four-quadrant plot tables.
• Perform pathway enrichment analysis on identified gene sets using the KEGG pathway table.

Strengths

• Contains 11 distinct, structured tables covering multiple analysis stages from a multi-omics study.
• Released under a permissive CC-BY-4.0 license, facilitating reuse and redistribution.
• File size of 6.6 MB indicates a manageable, downloadable dataset.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare, authored by Dandan Li.

Collection Method

Likely contains laboratory-generated data from ATAC-seq and mRNA-seq experiments on chicken granulosa cells.

Time Range

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Freshness

Last updated 2026-04-17 04:03:37; freshness should be verified.

Geography

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