Porcine Stem Cell Osteogenesis: RNA-seq and ATAC-seq Time-Course Analysis

Supplementary tables from a time-course analysis of porcine synovium-derived mesenchymal stem cells under in vitro osteogenic induction. The dataset includes summary statistics, differentially expressed genes, differentially accessible regions, and enrichment analysis results across days 0, 7, 14, and 21. It was authored by Shuaichen Li and last updated on 2026-04-17.

Use Cases

• Identify differentially expressed genes during osteogenic induction based on RNA-seq data tables.
• Analyze chromatin accessibility changes over time based on ATAC-seq data tables.
• Perform functional enrichment analysis based on GO and KEGG term tables.
• Investigate correlations between gene expression and promoter accessibility based on the Pearson correlation table.

Strengths

• Data is structured across 8 supplementary tables in an XLSX file.
• Includes multi-omics data (RNA-seq and ATAC-seq) from a defined time-course experiment.
• Last updated on 2026-04-17, indicating recent maintenance.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The 8.5 MB file size suggests a relatively small dataset.

Provenance

Source

figshare

Collection Method

In vitro osteogenic induction experiment with RNA-seq and ATAC-seq profiling.

Time Range

Time points at days 0, 7, 14, and 21 of induction.

Freshness

Last updated 2026-04-17 04:04:06