Mouse tRNA Sequences Across Strains with Anticodon and Copy Number Data

Supplementary Table S1 lists tRNA and tRNA-like sequences identified across all mouse strains. The table includes amino acid identity, anticodon, tRNA scores predicted by tRNAscan-SE, and copy numbers for each tRNA across mouse strains and the rn6 rat genome. It was authored by Andrew D. Holmes and last updated on 2026-05-14.

Use Cases

• Comparative genomics analysis based on tRNA sequences across multiple mouse strains.
• Studying gene-specific conservation and divergence based on predicted tRNA scores and amino acid identity.
• Analyzing copy number variation based on reported tRNA copy numbers across strains.
• Cross-species comparison based on included data from the rn6 rat genome.

Strengths

• Includes data from multiple mouse strains and a rat genome for cross-species comparison.
• Provides predicted tRNA scores, amino acid identity, and anticodon information for each sequence.
• File size is 6.6 MB, indicating a detailed supplementary dataset.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• Last updated 2026-05-14 04:38:35; freshness should be verified.

Provenance

Source

figshare

Collection Method

Sequences identified and predicted using tRNAscan-SE; some names correspond to mm10 reference annotations.

Freshness

Last updated 2026-05-14 04:38:35.