Gene Expression and Enrichment Analysis for Podocytes and Brain Organoids

Supplementary tables from a study comparing gene expression in human podocytes and brain/kidney organoids. The data includes lists of 600 and 344 genes, along with results from Gene Ontology, transcription factor, and Metascape enrichment analyses. The dataset was authored by Wasco Wruck and last updated on April 11, 2026.

Use Cases

• Identify conserved gene expression signatures based on the 344 genes common to podocytes and brain/kidney organoids.
• Analyze over-represented biological processes based on the Gene Ontology (GO) enrichment results.
• Investigate potential regulatory mechanisms based on the enriched transcription factors from ENCODE, TRANSFAC, JASPAR, and TRRUST datasets.
• Validate transcription factor expression in kidney tissue using the Proteinatlas validation data.

Strengths

• Includes results from multiple enrichment analyses (GO, transcription factors, Metascape).
• Provides specific gene counts, such as the 600 exclusively expressed genes and the 344 common genes.
• Data is structured in a single 336.6 KB Excel file for direct analysis.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare

Collection Method

Likely generated from comparative transcriptomic analysis of UdPodocytes and organoids.

Freshness

Last updated 2026-04-11 03:38:44; freshness should be verified.