Macaque and Human Gut Metagenome-Assembled Genomes for Type 2 Diabetes Research

Additional file 2 from a study on spontaneous diabetic macaques provides supplementary tables for gut microbiome analysis. The dataset includes summaries of macaque information, genome characterization, taxonomy labels, and metabolic pathway analysis for both macaque and human metagenome-assembled genomes (MAGs). Yuchen Xie authored this 211.4 KB Excel file, last updated on April 11, 2026.

Use Cases

• Compare genome completeness and contamination levels based on the characterization tables for macaque and human MAGs.
• Analyze taxonomic composition of gut microbial communities based on GTDB-TK annotated taxonomy labels.
• Identify significantly enriched metabolic functions in diabetic versus control groups based on KO term enrichment analysis.
• Study core genes in specific metabolic pathways like butanoate metabolism based on the dedicated pathway table.

Strengths

• Dataset provides structured supplementary tables for a published metagenomics study.
• Includes comparative data from both macaque and human subjects.
• Released under a permissive CC-BY-4.0 license for reuse.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The 211.4 KB file size suggests a limited scope of data.

Provenance

Source

figshare, authored by Yuchen Xie.

Collection Method

Likely derived from metagenomic sequencing and bioinformatic analysis of gut samples from macaques and humans.

Freshness

Last updated 2026-04-11 03:35:34; freshness should be verified.