Mexican SAT Single-Cell RNA-Seq Data for Cardiometabolic Disease Risk

49 samples of Mexican subcutaneous adipose tissue (SAT) single-nucleus RNA-seq data. Tables S3 to S12 contain cell-type proportions, marker genes, and differential expression analyses related to cardiometabolic traits. The dataset was authored by Asha Kar and last updated in May 2026.

Use Cases

• Analyze cell-type proportions in adipose tissue based on the summary tables.
• Identify unique marker genes for specific cell-types based on the listed marker gene tables.
• Investigate associations between transcriptomic variability and traits like BMI and HDL-cholesterol based on the MOFAcell analysis.
• Perform functional enrichment analysis on differentially expressed genes based on the enrichment results table.

Strengths

• Includes data from 49 individuals, providing a cohort-scale view.
• Contains multiple structured Excel tables covering cell-type proportions, marker genes, and differential expression.
• Focuses on a specific population (Mexican) and tissue (SAT), offering targeted insights.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• The 357.9 KB file size suggests a limited scope, likely containing summary tables rather than raw sequencing data.

Provenance

Source

figshare

Collection Method

Single-nucleus RNA sequencing of subcutaneous adipose tissue.

Freshness

Last updated 2026-05-07 04:36:13; freshness should be verified.

Geography

Mexico