Mouse tRNA Ortholog Sets Across Strains with Locus Identifiers

Supplementary Table S3 lists ortholog sets for tRNAs and tRNA-like elements across mouse strains. The 4.1 MB XLSX file was authored by Andrew D. Holmes and last updated on May 14, 2026. It includes locus identifiers from the mm10 reference genome and other strains, with 'NA' indicating missing orthologs.

Use Cases

• Identify conserved and divergent tRNA genes based on ortholog set comparisons.
• Study tRNA copy number variation across mouse strains using the listed ortholog sets.
• Map tRNA sequences to genomic loci using the provided mm10 and non-reference strain identifiers.

Strengths

• File size is 4.1 MB, indicating a detailed supplementary table.
• Data is structured with explicit notation ('NA') for missing orthologous elements.
• Includes locus identifiers from both reference (mm10) and non-reference mouse genomes.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare

Collection Method

Likely generated from comparative genomic analysis of mouse strains.

Freshness

Last updated 2026-05-14 04:38:37; freshness should be verified.