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Description
AssayBench contains 1,901 curated CRISPR screen entries derived from 1,565 unique screens in BioGRID ORCS (version 2025), spanning five major classes of cellular phenotypes. The dataset, created by Genentech, serves as a benchmark for evaluating computational models on phenotypic CRISPR screen prediction, a core capability of the 'virtual cell' paradigm. The dataset page was last updated on 2026-04-29.
Use Cases
Benchmarking virtual cell models based on curated CRISPR screen entries.
Training models for phenotypic prediction based on textual descriptions of CRISPR screen experiments.
Ranking gene perturbations based on predicted phenotypic outcomes from screen data.
Strengths
1,901 curated CRISPR screen entries provide a substantial benchmark.
Derived from 1,565 unique screens in BioGRID ORCS (version 2025), indicating a broad source.
Covers five major classes of cellular phenotypes, offering diverse evaluation targets.
Limitations
Column-level documentation is absent; field semantics must be inferred after download.
Row count is unknown, which may limit suitability assessment.
Freshness should be verified as the underlying source version is from 2025.
Provenance
Source
BioGRID ORCS (version 2025), curated by Genentech.
Collection Method
Curated entries derived from published CRISPR screens.
Freshness
Last updated 2026-04-29 05:53:29.
License is unknown; users should verify terms before use.