Betula Platyphylla ELIP and LHC Protein Sequence Data and Structural Models

1.0 MB of sequence data, structural models, and analysis outputs for Early Light-Inducible Proteins (ELIPs) and the Light-Harvesting Complex (LHC) superfamily in Betula platyphylla. The dataset was authored by preetom regon and last updated on 2026-05-03. Files include PDF, CIF, TXT, FA, HMM, FASTA, and TREEFILE formats.

Use Cases

• Predicting protein-DNA interactions based on sequence data and structural models.
• Comparative genomic analysis of the Light-Harvesting Complex (LHC) superfamily.
• Building phylogenetic trees using the provided TREEFILE data.
• Training or validating protein structure prediction models with the CIF structural files.

Strengths

• Data is openly licensed under CC-BY-4.0.
• Includes multiple analysis-ready file formats like FASTA and HMM.
• Contains structural models in CIF format alongside sequence data.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare

Collection Method

Associated with a study on ELIPs and the LHC superfamily; specific collection method is not detailed.

Freshness

Last updated 2026-05-03 07:27:41; freshness should be verified.