G4 EA H1N1 Swine Influenza Virus Genomes and Assay Data from China

Jiao Jun's dataset supports a study on the mammalian adaptation potential of G4 genotype Eurasian avian-like H1N1 swine influenza viruses. It contains complete genome sequences and raw data from 556 porcine samples collected in Northern Jiangsu, China, including results from receptor-binding and in vivo challenge studies. The dataset was last updated on May 6, 2026.

Use Cases

• Phylogenetic analysis of swine influenza viruses based on the provided whole-genome sequences
• Modeling viral replication kinetics based on the supplementary tables containing replication data
• Studying host immune response to infection based on cytokine expression data
• Assessing receptor-binding affinity changes in mammalian adaptation studies
• Comparing pathogenicity of different virus isolates using in vivo challenge data from mice and pigs

Strengths

• Includes complete genome sequences for two isolated G4 EA H1N1 viruses (FYD30 and YZF69)
• Raw data for 17 supplementary tables covering multiple assay types provides detailed experimental results
• Data is derived from 556 porcine samples, providing a basis for the study's findings

Limitations

• Column-level documentation is absent; field semantics must be inferred after download
• Row count for the underlying data tables is unknown, which may limit suitability assessment
• Data may reflect geographic bias inherent to its collection from a single region in China

Provenance

Source

Jiao Jun, via figshare

Collection Method

Samples collected from farms; methods include whole-genome sequencing, phylogenetic analysis, receptor-binding assays, polymerase activity assays, and in vivo challenge studies.

Freshness

Last updated 2026-05-06 04:20:08

Geography

Northern Jiangsu, China