Genome Annotation Files for Sphingobacterium faecium PAMC25397

A 33.1 MB collection of genome annotation files for the bacterial strain Sphingobacterium faecium PAMC25397. The dataset includes structural annotation outputs from Prokka v1.14.6 and functional annotations from eggNOG-mapper v2.1.12. Author minsu kim submitted the data alongside a manuscript to Microbiology Resource Announcements.

Use Cases

• Comparative genomics analysis based on the provided GenBank-format annotation.
• Functional gene characterization based on the eggNOG-mapper annotations (e.g., GO and KO terms).
• Genome assembly validation based on the provided assembled genome sequence (FNA).
• Proteomics research based on the predicted protein sequences (FAA).

Strengths

• Files are generated using specific, named bioinformatics tools (Prokka v1.14.6 and eggNOG-mapper v2.1.12).
• Includes multiple complementary file formats (GFF, GBK, TSV, FAA, FFN, FNA) for different analysis needs.
• Dataset is associated with a formal genome announcement manuscript submitted to a peer-reviewed journal.

Limitations

• Row count and column-level documentation are absent, requiring manual inspection after download.
• The 33.1 MB size suggests a relatively small-scale, single-genome dataset.

Provenance

Source

figshare

Collection Method

Computational annotation of a bacterial genome using Prokka and eggNOG-mapper pipelines.

Freshness

Last updated 2026-05-28 12:33:53.