Three draft genome sequences of Enterococcus faecalis strains (LAB1, LAB10, LAB11) isolated from tilapia aquaculture pond water at the University Nangui Abrogoua in Abidjan, Ivory Coast. Each genome is approximately 2.94 Mb with a GC content of 37.40% and contains between 2,872 and 2,875 predicted protein-coding sequences. The dataset was authored by Muiz Oluwatosin Akinyemi and last updated on 2026-05-31.
Use Cases
- Comparative genomics analysis based on the pan-genome analysis revealing 551 core gene clusters and 279 isolate-exclusive clusters.
- Screening for antimicrobial resistance genes based on the identified tet(M) and lsa(A) resistance determinants.
- Identification of virulence factors based on the 14 detected homologs, including Ebp pili and gelatinase genes.
- Functional annotation of probiotic and plant growth-promoting traits based on genes for stress tolerance, bile salt hydrolysis, and siderophore transport.
Strengths
- Genomic data for three distinct strains, each with a reported size of 2.94 Mb and over 2,870 protein-coding sequences.
- Includes detailed annotation results for resistance genes, virulence factors, and functional genes like katA and sodA.
- Clear provenance from a specific aquaculture farm at University Nangui Abrogoua in Ivory Coast.
Limitations
- Row count is unknown, which may limit suitability assessment.
- Column-level documentation is absent; field semantics must be inferred after download.
- The dataset is small (548.3 KB), indicating limited scope.
Provenance
- Source
- figshare
- Collection Method
- Isolation from pond water and subsequent genome sequencing and annotation.
- Freshness
- Last updated 2026-05-31 16:29:51; freshness should be verified.
- Geography
- Tilapia aquaculture farm at University Nangui Abrogoua, Abidjan, Ivory Coast.