Plastome and nrITS Sequences for Marsdenieae Tribe Phylogenetic Analysis

20 newly sequenced plastomes and 31 newly sequenced nrITS sequences from the Marsdenieae plant tribe, assembled from Illumina NovaSeq 6000 reads. The dataset includes additional sequences assembled from eight publicly available SRA accessions. Rong Chen published this data on figshare in May 2026 under a CC-BY-4.0 license.

Use Cases

• Conducting phylogenomic analyses based on plastome sequence data.
• Comparing plastome structural characteristics across genera.
• Reconstructing generic relationships within the Marsdenieae tribe.
• Assessing phylogenetic signals from nuclear ribosomal ITS sequences.
• Integrating newly sequenced data with publicly available SRA data for broader studies.

Strengths

• Includes 20 newly sequenced plastome assemblies.
• Includes 31 newly sequenced nrITS assemblies.
• Integrates data from eight publicly available SRA accessions.
• Sequencing performed on the Illumina NovaSeq 6000 platform with 150 bp paired-end reads.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• Data may reflect geographic bias inherent to the sampled Asian genera.

Provenance

Source

Rong Chen via figshare.

Collection Method

Total genomic DNA extracted from leaf material, libraries prepared with NEBNext Ultra II DNA Library Prep Kit, and sequenced on Illumina NovaSeq 6000.

Freshness

Last updated 2026-05-12 09:06:12; freshness should be verified.

Geography

Emphasis on Asian genera, but specific geographic coverage is not detailed.