VeloRM: Single-Cell RNA Modification Velocity Data for m6A and A-to-I Editing

A 14.1 GB computational dataset supporting the VeloRM framework for inferring RNA modification kinetics. The data includes processed single-cell epitranscriptome datasets for N6-methyladenosine (m6A) and A-to-I editing, enabling analysis of pre- and post-splicing RNA states. The dataset was authored by Haozhe Wang and last updated on April 3, 2026.

Use Cases

• Infer RNA modification velocity based on pre- and post-splicing epitranscriptome states described in the framework.
• Predict future epitranscriptome landscapes of individual cells based on the described kinetic modeling.
• Analyze distinct modification patterns on pre-splicing versus post-splicing RNAs near splicing junctions as mentioned in the study.
• Align single-cell epitranscriptome dynamics with known cell cycle and differentiation trajectories as referenced in the description.

Strengths

• Dataset size is 14.1 GB, indicating substantial data volume.
• Includes data for two specific RNA modifications: m6A and A-to-I editing.
• Provides cell cycle stage labels and gene expression data (TPM) from a referenced study.
• License is CC-BY-4.0, permitting open sharing and adaptation.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare

Collection Method

Likely generated from scDART-seq and RNA-Seq A-to-I editing data analyses as described.

Time Range

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Freshness

Last updated 2026-04-03 18:31:00.

Geography

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