BLAST Output of Potential T-DNA Insertion Locations

Matthew Davis published a text file containing BLAST output of potential T-DNA insertion locations. The dataset is 5.4 KB in size and was last updated on April 25, 2026. Three locations from the output were later validated through bioinformatic and molecular biology methods.

Use Cases

• Validate potential T-DNA insertion sites based on BLAST output.
• Benchmark bioinformatic pipelines for identifying insertion locations.
• Train models to predict successful genetic insertions based on sequence alignment features.

Strengths

• Includes validation information, with three locations confirmed through bioinformatic and molecular biology.
• Dataset is openly licensed under CC-BY-4.0.
• File size is small (5.4 KB), facilitating quick download and inspection.

Limitations

• Row count and column-level documentation are absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.
• The dataset's small size (5.4 KB) indicates a very limited scope.

Provenance

Source

Matthew Davis via figshare

Collection Method

BLAST output, with subsequent validation.

Freshness

Last updated 2026-04-25 06:32:42; freshness should be verified.