CCHFV-GP38 Breadth: Phylogenetic Tree and Multiple Sequence Alignment

Kartik Chandran published a phylogenetic dataset on figshare in May 2026. It contains a multiple sequence alignment (MSA) of 302 GP38 protein sequences and a corresponding phylogenetic tree file. The dataset is licensed under CC-BY-4.0 and is 140.9 KB in size.

Use Cases

• Constructing phylogenetic trees based on the provided Newick format tree file.
• Analyzing sequence conservation and variation using the multiple sequence alignment of 302 GP38 sequences.
• Studying the evolutionary relationships of CCHFV GP38 proteins across different strains.
• Benchmarking phylogenetic inference or sequence alignment algorithms with a provided reference alignment.

Strengths

• Includes a multiple sequence alignment of 302 specific GP38 protein sequences.
• Provides a phylogenetic tree generated by average distance node method.
• Published under a permissive CC-BY-4.0 license for reuse.

Limitations

• Row count for the alignment is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare

Collection Method

Likely contains computational outputs from sequence alignment and phylogenetic tree construction.

Time Range

null

Freshness

Last updated 2026-05-15 19:33:41; freshness should be verified.

Geography

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