Chouioia cunea Genome: Chromosome-Level Assembly of a Parasitic Wasp
by Ziqi Wang
Available on 1 platform
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Description
171.99 Mb genome assembly of the parasitic wasp Chouioia cunea, containing 6 chromosomes and 12,258 annotated protein-coding genes. The assembly, contributed by Ziqi Wang, includes annotations for repeat sequences, noncoding RNAs, and gene family evolution. Results show 26.06 Mb of repeat sequences and 431 predicted noncoding RNAs, including micro-RNAs and transfer RNAs.
Use Cases
Comparative genomics analysis based on the 12,258 annotated protein-coding genes.
Studying gene family evolution based on the 9,204 clustered gene families with expansions and contractions.
Investigating repeat sequence biology based on the 26.06 Mb of identified repeats.
Analyzing noncoding RNA function based on the predicted set of 431 ncRNAs.
Strengths
Chromosome-level assembly with a total length of 171.99 Mb across 6 chromosomes.
Comprehensive gene annotation with 12,258 protein-coding genes and detailed UTR annotations.
Detailed characterization of repeat sequences (26.06 Mb) and noncoding RNAs (431 predicted).
Limitations
Column-level documentation is absent; field semantics must be inferred after download.
Row count is unknown, which may limit suitability assessment.
Last update date is unknown; freshness unverified.
Provenance
Source
Ziqi Wang via paperswithcode
Collection Method
Genome sequencing and assembly, likely from a research publication.
License is listed as Open Access (green); specific usage terms should be verified from the source.