896,015,205 base pair genome assembly of the Antarctic vascular plant Colobanthus quitensis across 41 chromosomes. The assembly was generated by Huiwon Choi using PacBio Revio and Nanopore Pore-C sequencing, with functional annotation via BLAST and InterProScan. The dataset was last updated on 2026-05-21.
Use Cases
- Study plant genome structure and evolution based on the chromosome-level assembly.
- Investigate gene function and pathways based on the provided GO term and enzyme code annotations.
- Compare genomic features like GC content and contiguity with other plant species.
- Analyze gene models and domain architecture based on the InterPro domain annotations.
Strengths
- Chromosome-level assembly with a contig N50 of 22,438,103 base pairs.
- Comprehensive functional annotation including BLAST hits, GO terms, enzyme codes, and InterPro domains.
- Specific assembly size of 896,015,205 base pairs and GC content of 36.16%.
Limitations
- Column-level documentation is absent; field semantics must be inferred after download.
- Row count is unknown, which may limit suitability assessment.
Provenance
- Source
- Huiwon Choi via figshare.
- Collection Method
- Generated from genomic DNA using PacBio Revio long-read sequencing and Nanopore Pore-C scaffolding.
- Freshness
- Last updated 2026-05-21 05:01:34; freshness should be verified.
- Geography
- Antarctica (specific to Colobanthus quitensis).