HvPMTR1: Barley Melatonin Receptor Coding and Protein Sequence

A 1.3 KB FASTA file contains the coding DNA and protein sequence for HvPMTR1, a putative melatonin receptor in barley (Hordeum vulgare). The sequence was retrieved from the BarleyOmics database via BLASTn using an Arabidopsis thaliana query and corresponds to gene accession HORVU.MOREX.r3.5HG0511510. Author Roohollah Shamlooo-Dashtpagerdi published this third-party annotation on figshare under a CC0-1.0 license, last updated on 2026-04-17.

Use Cases

• Phylogenetic tree construction based on the HvPMTR1 coding sequence.
• Protein structure modeling based on the provided protein sequence.
• Molecular docking simulations with melatonin using the receptor sequence.
• Promoter analysis for the HvPMTR1 gene based on its genomic context.

Strengths

• File size is precisely 1.3 KB, indicating a small, focused dataset.
• Sequence is linked to a specific gene accession (HORVU.MOREX.r3.5HG0511510).
• Data is published under a permissive CC0-1.0 license.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Data is a third-party annotation of an existing public sequence; no new sequencing was performed.

Provenance

Source

BarleyOmics database (https://www.barleymdb.cn/home/)

Collection Method

Retrieved via BLASTn using Arabidopsis thaliana PMTR1 (AT3G05010) as a query.

Freshness

Last updated 2026-04-17 04:56:23; freshness should be verified.