Archaeal Genomic Comparison of BGC and Shikimate Pathway Regions

A comparative genomic analysis between the Aegir_M39_B193 region and the Thermoproteus tenax locus. The dataset includes files for analysis and visualization, created by Trong Thuc Nguyen and last updated in April 2026. It is a small collection of files totaling 910.4 KB.

Use Cases

• Identify conserved gene groups across archaeal species using clinker/CAGECAT output files.
• Analyze the genomic organization of a predicted 2dos BGC adjacent to shikimate pathway genes from the GBK file.
• Visualize gene cluster comparisons using the generated SVG files.

Strengths

• Includes multiple analysis file formats (TXT, GBK, JSON, SVG) for different use cases.
• Dataset is openly licensed under CC-BY-4.0.

Limitations

• Very small dataset at 910.4 KB, indicating limited scope and likely a single case study.
• No row or column count provided, making data volume and structure unclear.

Provenance

Source

figshare, authored by Trong Thuc Nguyen.

Collection Method

Comparative genomic analysis performed using clinker and CAGECAT tools.

Time Range

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Freshness

Last updated in April 2026.

Geography

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