Complete Y Chromosome Assembly for the Chinese Quartet with 164 Protein-Coding Genes

Bo Wang published a dataset on 2026-04-09 containing a complete telomere-to-telomere assembly of the human Y chromosome for the Chinese Quartet. The dataset includes annotations for 164 protein-coding genes, generated using the ANNEVO (v2.2.2) tool with the "ANNEVO_Mammalia2.pt" model. The data is provided in the GFF3 file format and is 227.4 KB in size.

Use Cases

• Study the complete structure and gene organization of the human Y chromosome based on the telomere-to-telomere assembly.
• Analyze protein-coding gene content and annotation for the Y chromosome in the Chinese Quartet reference genomes.
• Use the GFF3 annotations as a reference for comparative genomics or population genetics studies.
• Validate or benchmark gene annotation pipelines against the ANNEVO tool's output for mammalian genomes.

Strengths

• Contains annotations for 164 specific protein-coding genes.
• Provides a complete telomere-to-telomere assembly, a high-quality genomic resource.
• Uses a specific, named annotation tool and model (ANNEVO v2.2.2 with ANNEVO_Mammalia2.pt).

Limitations

• Row count and specific column-level documentation are unknown.
• The dataset is very small (227.4 KB), indicating limited scope or a highly specific, processed subset of genomic data.

Provenance

Source

Bo Wang via figshare.

Collection Method

Genes were annotated using ANNEVO (v2.2.2) with the "ANNEVO_Mammalia2.pt" model.

Freshness

Last updated 2026-04-09 02:01:22.

Geography

Chinese Quartet (presumably a reference to four Chinese individuals or genomes).