Phylogenetic trees generated from a concatenated alignment, including a RAxML best tree file with bootstrap values and a Bayesian consensus tree. The dataset was contributed by author Rebecca B. Dikow and is available via the paperswithcode platform under an Open Access (green) license. Specific details on the number of taxa, alignment length, and creation date are not provided in the input.
Use Cases
- Comparing phylogenetic inference methods based on the provided RAxML and Bayesian consensus trees.
- Assessing branch support in evolutionary hypotheses based on the bootstrap values included in the RAxML tree.
- Using the concatenated alignment as a starting point for further phylogenetic analyses or simulations.
Strengths
- Includes outputs from two standard phylogenetic inference methods (RAxML and Bayesian analysis).
- The RAxML tree file contains bootstrap values, which are a common measure of branch support.
Limitations
- Row count is unknown, which may limit suitability assessment.
- Column-level documentation is absent; field semantics must be inferred after download.
- Last update date is unknown; freshness unverified.
Provenance
- Source
- paperswithcode
- Collection Method
- Likely generated from a concatenated sequence alignment using phylogenetic software.