Mouse Microarray Correlation Networks for Community Detection

Comprising correlation networks from mouse microarray experiments, used to evaluate the ConfeitoGUI toolkit for size-sensitive community detection. The toolkit was developed by Yoshiyuki Ogata and published in 2020.

Use Cases

• Evaluate size-sensitive community detection algorithms on correlation networks from mouse microarray data.
• Benchmark the ConfeitoGUI toolkit's performance in reconstructing communities with preferred sizes against other common tools.
• Analyze gene co-expression patterns within detected communities from the correlation network.

Strengths

• Dataset is associated with a peer-reviewed publication describing the ConfeitoGUI toolkit.
• Released under a permissive CC0 1.0 public domain license.
• Focuses on a specific application: community detection in biological correlation networks.

Limitations

• The specific number of rows, columns, and sample data are unavailable.
• The dataset's scope is limited to mouse microarray experiments, which may limit generalizability.
• The data was last updated in June 2020 and may not reflect the latest biological knowledge.

Provenance

Source

Dryad digital repository.

Collection Method

Derived from microarray experiments on mice, processed into correlation networks.

Freshness

Last updated on 2020-06-24.