Foxtail Millet SHAGGY-like Kinase Gene Family Identification and Expression Analysis

A Kangjie Qin study identified 9 SHAGGY-like kinase gene family members in foxtail millet (Setaria italica L.). The dataset includes results from phylogenetic classification, chromosomal localization, and expression analysis under abiotic stresses and hormone treatments. The data was last updated on 2026-06-01.

Use Cases

• Phylogenetic classification of kinase genes based on the described subfamily structure.
• Analysis of gene expression patterns in response to drought, cold, and NaCl stress treatments.
• Investigation of hormonal signaling pathways based on gene responses to ABA and MeJA.
• Comparative genomics of conserved domains and motifs within the SHAGGY-like kinase family.

Strengths

• Identifies a specific set of 9 gene family members.
• Includes expression data from stress treatment experiments (drought, cold, NaCl, ABA, MeJA).
• Analysis integrates bioinformatics with qRT-PCR validation.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• The dataset is small (673.4 KB), indicating limited scope.

Provenance

Source

figshare

Collection Method

Bioinformatics analysis combined with quantitative real-time PCR (qRT-PCR).

Freshness

Last updated 2026-06-01 05:26:48; freshness should be verified.