Microbial Community Dynamics in an Integrated Aquaculture Biofilter Over 5 Weeks

16S rRNA gene amplicon sequencing data examines microbial community assembly and potential functions in a marine integrated multi-trophic aquaculture system. The dataset, authored by Dzung Nguyen and last updated on 2026-04-21, likely contains profiles from periphyton, Ulva fasciata seaweed, and rearing water over a 5-week period.

Use Cases

• Analyzing spatial microbial beta diversity based on comparisons between periphyton, Ulva thallus, and rearing water compartments.
• Investigating temporal dynamics of microbial communities based on weekly sampling over 5 weeks.
• Comparing functional potential for nitrogen and sulfur metabolism based on inferred gene prevalence across different biofilter components.
• Studying the role of environmental selection in microbial assembly based on data from interconnected biofilters with high water dispersal.

Strengths

• Data spans a 5-week temporal series, allowing for analysis of microbial dynamics.
• Analysis covers three distinct compartments: periphyton, Ulva thallus, and rearing water.
• Dataset is shared under a permissive CC-BY-4.0 license.

Limitations

• Row count and specific column-level documentation are unknown, which may limit suitability assessment.
• The primary data file is a 1.8 MB DOCX document, suggesting processed results rather than raw sequence reads.
• Description metadata is limited; actual data quality and structure require manual inspection after download.

Provenance

Source

figshare

Collection Method

16S rRNA gene amplicon sequencing of samples from an integrated multitrophic aquaculture system.

Time Range

Study duration of 5 weeks.

Freshness

Last updated 2026-04-21 05:34:41; freshness should be verified.