O-SNAP: Spatial Profiling Data for Chromatin Architecture

Data supporting the publication 'O-SNAP: A comprehensive pipeline for spatial profiling of chromatin architecture' by Kim et al. The 15.0 GB collection includes files in PRISM, PNG, CSV, ZIP, MAT, and RDATA formats. It was authored by Hannah Kim and last updated on April 15, 2026.

Use Cases

• Benchmarking spatial chromatin profiling pipelines based on the O-SNAP method described.
• Training or validating models for chromatin architecture prediction using the provided spatial data.
• Reproducing the analysis and figures from the associated Kim et al. 2025 publication.

Strengths

• Dataset size is 15.0 GB, indicating a substantial volume of supporting data.
• Includes multiple file formats (PRISM, PNG, CSV, ZIP, MAT, RDATA), suggesting diverse data types.

Limitations

• Column-level documentation and sample data are unavailable, requiring manual inspection after download.
• Row count is unknown, which may limit suitability assessment for specific tasks.
• The description metadata is limited to the publication title and author.

Provenance

Source

Hannah Kim via figshare.

Collection Method

Data generated to support the O-SNAP pipeline publication.

Freshness

Last updated 2026-04-15 20:01:50