Coleus hadiensis Chromosome-Scale Genome Assembly with Terpene Synthase Clusters

Yoshikazu Furuta provides a 1.83 Gbp chromosome-level reference genome for the aromatic ornamental plant Coleus hadiensis. The genome assembly was generated using long-read sequencing and Hi-C scaffolding and includes annotations for repeats, terpene-related gene families, and flowering-associated regulators. It was last updated on May 22, 2026.

Use Cases

• Identify terpene synthase genes and tandem clusters based on the genome-wide annotation of 128 coding sequences.
• Study flowering regulation mechanisms based on the genome-wide survey of phosphatidylethanolamine-binding protein genes.
• Analyze genome architecture and repeat content based on the identification of Copia-type long terminal repeat retrotransposons.
• Support genomics-assisted breeding programs for Coleus hadiensis based on the foundational genome assembly.

Strengths

• Chromosome-level assembly provides high-resolution genomic structure.
• Includes annotation of 128 terpene synthase coding sequences across multiple subfamilies.
• Genome size of 1.83 Gbp is explicitly stated.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.

Provenance

Source

figshare

Collection Method

Long-read sequencing and Hi-C scaffolding.

Freshness

Last updated 2026-05-22 05:33:32; freshness should be verified.