Amplicon sequencing data from in vitro rumen fermentation experiments evaluating multi-species microbial combinations. The dataset includes separate OTU tables for bacterial (16S rRNA) and eukaryotic (18S rRNA) communities across treatments with individual and combined strains. Data was generated by author Tarrah, Armin and last updated on 2026-05-02.
Use Cases
- Analyze shifts in bacterial community composition based on 16S rRNA gene amplicon sequencing data.
- Assess potential synergistic interactions between microbial strains based on combined supplementation treatments.
- Evaluate the effect of specific bacterial and yeast strains on rumen microbial diversity.
- Compare eukaryotic community responses to treatments based on 18S rRNA gene amplicon sequencing data.
Strengths
- Data targets both bacterial (16S rRNA) and eukaryotic (18S rRNA) communities, providing a multi-kingdom view.
- Treatments include individual and combined supplementation of specific bacterial and yeast strains, enabling interaction analysis.
- Experiments were conducted under controlled in vitro conditions with a consistent rumen fluid source.
Limitations
- Column-level documentation is absent; field semantics must be inferred after download.
- Row count is unknown, which may limit suitability assessment.
- Description metadata is limited; actual data quality requires manual inspection after download.
Provenance
- Source
- Borealis Harvested Dataverse
- Collection Method
- In vitro rumen fermentation experiments with amplicon sequencing.
- Freshness
- Last updated 2026-05-02 04:11:24; freshness should be verified.