Green Jujube Fruit Gene Expression Across 16 Developmental Stages

Green jujube (Ziziphus mauritiana) is an economically important fruit tree. This dataset provides temporal transcriptomic profiling across 16 developmental stages from 14 to 119 days after fruit setting, with three biological replicates per stage. It was created by Xudong Zhu and last updated in May 2026.

Use Cases

• Identify gene expression patterns based on temporal profiling across 16 developmental stages.
• Analyze molecular pathways underlying fruit development based on RNA-seq data.
• Investigate biological reproducibility based on principal component analysis and Pearson correlation results.
• Support genetic improvement efforts for green jujube based on transcriptome resource.

Strengths

• Data spans 16 distinct developmental stages from 14 to 119 days after fruit setting.
• Includes three biological replicates per stage, totaling 48 RNA-seq libraries.
• High data quality indicated by an average Q30 of 97.49% and a unique mapping rate of 93.20%.
• Generated approximately 303.68 Gb of raw data and 302.77 Gb of clean data.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• Data may reflect temporal bias inherent to the specific developmental stages sampled.

Provenance

Source

figshare

Collection Method

RNA-sequencing of green jujube fruit samples.

Time Range

Developmental stages from 14 to 119 days after fruit setting.

Freshness

Last updated 2026-05-28 07:31:18; freshness should be verified.