Genetic Variants in OMM12 Species and E. coli from Gnotobiotic Mice

Tables of genetic variants identified in OMM12 species and Escherichia coli isolates. The data originates from bacterial strains re-isolated from long-term-colonized gnotobiotic mice. The dataset is 426.8 KB in size, authored by AGSTECHER, and was last updated on May 26, 2026.

Use Cases

• Compare genetic variation between OMM12 species and E. coli isolates based on the described bacterial strains.
• Analyze microbial evolution in a controlled host environment based on the long-term colonization in gnotobiotic mice.
• Identify potential genetic markers for bacterial adaptation based on the described variant data.
• Correlate genetic changes with colonization duration based on the 'long-term-colonized' context.

Strengths

• Data is openly available under the CC-BY-4.0 license.
• The dataset is stored in a TSV format, which is a standard tabular format.
• The dataset has a specific last updated timestamp: 2026-05-26 00:10:09.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare

Collection Method

Likely derived from sequencing and analysis of bacterial isolates from gnotobiotic mice.

Freshness

Last updated 2026-05-26 00:10:09; freshness should be verified.