HAPNEST Data Full: Synthetic Genomic Resource for 100,000 Individuals

100,000 synthetic individuals across all 22 autosomes are represented in this high-fidelity genomic resource. The dataset, generated using the Hapnest framework by author Koka, Taulant of HAPNEST Data, was last updated on April 9, 2026. It is designed to mimic the scale and complexity of modern biobanks for benchmarking computational genetics tools.

Use Cases

• Benchmarking genome-wide association study (GWAS) pipelines based on the synthetic genomic data for 100,000 individuals.
• Testing polygenic risk score (PRS) algorithms based on the full-scale, biobank-mimicking synthetic resource.
• Evaluating population genetic software performance based on data spanning all 22 autosomes.

Strengths

• Contains data for 100,000 synthetic individuals, matching the scale of modern biobanks.
• Covers all 22 autosomes, providing a full genomic scope.
• Designed specifically for benchmarking high-performance computational genetics workflows.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.

Provenance

Source

HAPNEST Data

Collection Method

Synthetically generated using the Hapnest framework.

Time Range

Runs 11-20 of the generation process.

Freshness

Last updated 2026-04-09 11:41:19; freshness should be verified.

Geography

Synthetic data; no specific geographic coverage.