HUH7 RNAseq: Normalized Gene Expression Matrix

HUH7 RNAseq matrix normalized with EdgeR and Voom, associated with a phenotype file. Christophe Desterke published the 1.9 MB CSV file on figshare under a CC-BY-4.0 license. The dataset was last updated on 2026-04-10.

Use Cases

• Analyze differential gene expression based on normalized RNAseq counts
• Integrate expression data with phenotypic traits using the associated phenotype file
• Benchmark normalization methods (EdgeR and voom) for RNAseq data
• Train models for gene expression prediction or classification

Strengths

• Data is normalized using established bioinformatics methods (EdgeR and voom)
• File size is 1.9 MB, indicating a manageable download
• License is CC-BY-4.0, allowing for open reuse

Limitations

• Row count is unknown, which may limit suitability assessment
• Column-level documentation is absent; field semantics must be inferred after download
• Description metadata is limited; actual data quality requires manual inspection after download

Provenance

Source

figshare

Freshness

Last updated 2026-04-10 07:33:28; freshness should be verified