TaICL Sequence Data: Alignments and Phylogenetic Analysis Files

Grace Taylor-Balls published this 1.7 MB dataset on figshare in April 2026. It includes unaligned and aligned sequences, phylogenetic trees, and CRISPR-Cas9 RNA guides for Oryza sativa indica group. The dataset is licensed under CC-BY-4.0.

Use Cases

• Construct phylogenetic trees based on aligned orthologue sequences.
• Analyze sequence homology and variation based on aligned TaICL homoeologue sequences.
• Design CRISPR-Cas9 experiments based on RNA guides for Oryza sativa indica group.
• Map gene orthology relationships based on the table of TaICL orthologues.

Strengths

• Dataset includes multiple analysis-ready file formats (TSV, FA, ALN, TRE).
• Files are annotated for visualization with iTOL annotation files.
• License is clearly stated as CC-BY-4.0.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare

Freshness

Last updated 2026-04-27 07:26:13; freshness should be verified.