Molecular Redox Sites and Humic-Reducing Microorganisms in Biowaste Compost

Insights into Extracellular Respiration Interfaces is a dataset by Xinyu Zhao, last updated in April 2026. It integrates molecular metacommunity ecology with theoretical models to probe extracellular electron transfer in compost, correlating redox sites with 88 humic-reducing microorganisms. The 38.4 MB dataset includes 35 models and 3D imaging snapshots of condensed molecules from three compost types.

Use Cases

• Modeling microbial-mediated extracellular electron transfer (EET) chains based on described molecular interactions.
• Correlating electron-accepting/-donating capacity (EAC/EDC) of molecules with specific humic-reducing microorganisms (HRMs).
• Analyzing HRM substrate preferences for lignin-derived polyphenols or aliphatic/protein substrates across different composts.
• Investigating the influence of intermolecular interactions like H-bonding and π-stacking on redox processes.

Strengths

• Includes 35 models correlating molecules with 88 identified humic-reducing microorganisms (HRMs).
• Integrates 3D imaging snapshots of condensed molecules to establish EET chains.
• Analyzes three distinct compost types (Composts I–III), showing variation in HRM preferences.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare

Collection Method

Integrated molecular metacommunity ecology with a theoretical molecular model, based on 3D imaging snapshots.

Time Range

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Freshness

Last updated 2026-04-13 06:13:26; freshness should be verified.

Geography

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