Leontodon longirostris Genome Draft with 853 Gene Models

Leontodon longirostris genome draft is a 418 Mb assembly provided as FASTA sequences. It includes 853 MAKER-based gene models and 472 GeneAssembler-based chimaeric gene models, both with functional annotations. The dataset was contributed by M. Gonzalo Claros and is available via paperswithcode.

Use Cases

• Assessing genome assembly quality based on scaffold and contig sequences.
• Studying gene structure and prediction using the provided MAKER and GeneAssembler gene models.
• Performing functional genomics analysis based on the annotated protein sequences.
• Investigating gene model fragmentation using the provided fragmentation index for chimaeric models.

Strengths

• Provides a specific genome size of 418 Mb.
• Includes 853 MAKER-based gene models with functional annotation.
• Contains 472 additional GeneAssembler-based chimaeric gene models with detailed metadata like fragmentation index.

Limitations

• Description metadata is limited; actual data quality requires manual inspection after download.
• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.

Provenance

Source

M. Gonzalo Claros via paperswithcode

Collection Method

Genome assembly and gene prediction, likely from sequencing data.