Tag-based RNA-Seq and settlement data from an experiment exposing nine-day-old Acropora millepora coral larvae to ten concentrations of 1-methylnaphthalene for 48 hours. The data collection is associated with a research publication and raw sequencing data is available in the NCBI Sequence Read Archives. It was published via the Australian Ocean Data Network.
Use Cases
- Modeling dose-response relationships for coral larval settlement based on pollutant concentration.
- Analyzing differential gene expression in coral larvae based on RNA-Seq data.
- Investigating molecular pathways of hydrocarbon toxicity in early coral life stages.
Strengths
- Data is linked to a full research publication, GitHub repository, and NCBI BioProject (PRJNA1470448) for methodological details.
- Experimental design includes ten nominal concentrations (0–4000 µg L–¹) of 1-methylnaphthalene.
- Includes multiple data types and formats (CSV, XLSX, PNG, TXT, HTML).
Limitations
- Column-level documentation is absent; field semantics must be inferred after download.
- Row count is unknown, which may limit suitability assessment.
- Description metadata is limited; actual data quality requires manual inspection after download.
Provenance
- Source
- Australian Ocean Data Network
- Collection Method
- Experimental exposure of coral larvae and subsequent Tag-based RNA-Seq processing.
- Time Range
- null
- Freshness
- Last updated 2026-06-27 18:57:06.315965; freshness should be verified.
- Geography
- null