MSC Aging Agent Corpus: Stem Cell Aging Transcriptome Associations

20,045 screened transcriptome associations related to mesenchymal stem/stromal cell aging. The corpus was compiled by S4MPL3BI4S from 19 public GEO datasets and 2 simulated umbilical MSC panels, with scripts hosted on SampleBias/MSC_Age_Research. It was last updated on June 12, 2026.

Use Cases

• Training models to identify aging biomarkers based on transcriptome associations.
• Benchmarking analysis pipelines for stem cell aging research using the screened public GEO data.
• Developing or testing simulation models for MSC aging with the included AUR_SIM datasets.

Strengths

• Contains 20,045 screened and retained transcriptome associations.
• Integrates data from 19 distinct public GEO datasets.
• Includes 2 clearly labeled simulated datasets for umbilical MSC panels.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count and file formats are unknown, which may limit suitability assessment.
• Data may reflect source bias inherent to the specific public GEO datasets used.

Provenance

Source

Public GEO datasets and simulated panels, compiled by S4MPL3BI4S.

Collection Method

Screened and agent-ready associations from public data plus simulated data.

Freshness

Last updated 2026-06-12 00:59:56.