Gastrodia Elata Pan-Genome Assembly and Annotation Files

Genome assembly and annotation files from a pan-genome study of the mycoheterotrophic orchid Gastrodia elata. The dataset includes sequences and annotations for dark-red G. elata and re-annotated data from a 2022 reference genome, totaling 2.5 GB. It was authored by Mingjin Huang and last updated on May 16, 2026.

Use Cases

• Conducting phylogenetic analysis based on re-annotated genome data from 2022
• Performing pan-genome analysis using re-assembled CDS and protein sequences from 12 samples
• Studying symbiotic evolution through genomic features of a mycoheterotrophic medicinal orchid

Strengths

• 2.5 GB of genomic data including assembly sequences and structural annotations
• Includes data from a previously published 2022 reference genome for comparative analysis
• Uses a unified pipeline for sequence assembly and prediction across 12 samples

Limitations

• Column-level documentation is absent; field semantics must be inferred after download
• Row count is unknown, which may limit suitability assessment
• Data may reflect taxonomic bias inherent to the single-species focus

Provenance

Source

figshare

Collection Method

Genome assembly and annotation generated from a pan-genome study.

Freshness

Last updated 2026-05-16 08:39:13