Significantly Differentially Expressed Genes from Pairwise Comparisons

A list of genes significantly differentially expressed for at least one pairwise comparison at 6 hours. The dataset was authored by Mariane Pivard and is available under a CC-BY-4.0 license. It was last updated on June 3, 2026.

Use Cases

• Identify upregulated or downregulated genes based on fold change thresholds mentioned in the description
• Perform statistical validation of differential expression based on adjusted p-values mentioned in the description
• Cross-reference gene annotations using the Aureowiki Newman and pangenome naming conventions described

Strengths

• Includes statistical significance annotations (adjusted p-value < 0.05) as described
• Provides fold-change classifications (FC > 2 and FC < -2) as described
• Uses a standardized gene annotation system (Aureowiki Newman) as described

Limitations

• Column-level documentation is absent; field semantics must be inferred after download
• Row count is unknown, which may limit suitability assessment
• Data may reflect temporal or experimental bias inherent to the source study

Provenance

Source

figshare

Collection Method

Negative Binomial GLM with Wald test for pairwise comparisons with Benjamini–Hochberg correction, as described.

Time Range

Data relates to a 6-hour experimental time point.

Freshness

Last updated 2026-06-03 17:36:52; freshness should be verified