CheckM2 Analysis of Cluster 19 Genomes: Completeness and Contamination

CheckM2 analysis results for a cluster of 19 genomes, showing genome completeness and contamination details. The dataset is an Excel file of 40.5 KB, created by Nikhil Bhalla and last updated on 2026-05-18. It is shared under a CC-BY-4.0 license on figshare.

Use Cases

• Assess genome completeness for downstream analysis based on the CheckM2 completeness metric.
• Evaluate genome contamination levels based on the CheckM2 contamination metric.
• Filter or select high-quality genomes from a cluster based on provided quality scores.
• Benchmark genome quality assessment tools against CheckM2 results for cluster 19.

Strengths

• Provides specific quality metrics (completeness, contamination) for 19 genomes.
• File size is 40.5 KB, making it quick to download and inspect.
• License is CC-BY-4.0, allowing for flexible reuse and sharing.

Limitations

• Description metadata is limited; actual data quality requires manual inspection after download.
• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.

Provenance

Source

Nikhil Bhalla via figshare

Collection Method

Analysis performed using the CheckM2 tool.

Freshness

Last updated 2026-05-18 17:33:33; freshness should be verified.