K02288 RNA-Seq, BMP2/4MO RNA-Seq and LG4dP anti-pSMAD1/5 ChIP-Seq Comparison

Paul Knabl published a dataset comparing RNA-Seq and ChIP-Seq data related to BMP signaling pathways on figshare in May 2026. The 7.0 MB dataset is available as an XLSX file under a CC-BY-4.0 license. It likely contains gene expression and chromatin binding data from experiments involving BMP2/4 morpholino knockdowns and anti-pSMAD1/5 antibodies.

Use Cases

• Compare gene expression changes based on RNA-Seq data from BMP2/4 morpholino knockdown experiments.
• Analyze SMAD1/5 transcription factor binding sites based on anti-pSMAD1/5 ChIP-Seq data.
• Integrate RNA-Seq and ChIP-Seq results to identify direct BMP target genes.
• Validate BMP pathway perturbations by correlating transcriptional and chromatin occupancy changes.

Strengths

• Dataset is 7.0 MB, indicating a manageable size for analysis.
• Published under a CC-BY-4.0 license, allowing for open reuse and redistribution.
• Last updated on 2026-05-21, suggesting recent curation.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare

Freshness

Last updated 2026-05-21 17:42:59; freshness should be verified.