Mouse scRNA-seq: IGNITE Method Comparison for Gene Interaction Inference

A 5.5 KB Excel table comparing four inference methods on a mouse single-cell RNA-sequencing dataset. The table reports the fraction of correctly inferred known interactions (FCI) and Spearman correlation scores between the IGNITE method and others. Authored by Clelia Corridori and last updated on April 15, 2026.

Use Cases

• Benchmarking gene interaction inference methods based on the reported fraction of correctly inferred interactions (FCI).
• Comparing correlation of interaction strengths between the IGNITE method and other algorithms.
• Validating network inference performance on a specific log-normalized and processed mouse scRNA-seq dataset.

Strengths

• Dataset is small (5.5 KB), facilitating quick download and inspection.
• Provides a direct quantitative comparison of four inference methods using two specific metrics (FCI and Spearman correlation).

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare, authored by Clelia Corridori.

Collection Method

Likely contains results from computational analysis of a processed mouse scRNA-seq dataset.

Freshness

Last updated 2026-04-15 17:40:29; freshness should be verified.