Depth of Coverage by Genes for HBV Samples from Long-Read Sequencing

Depth of coverage by genes of HBV samples is a dataset related to viral quasispecies analysis. The data was generated by author Nakarin Pamornchainavakul and last updated on April 28, 2026. It is a 9.2 KB Excel file containing coverage depth information for Hepatitis B Virus genes.

Use Cases

• Benchmarking viral quasispecies reconstruction methods based on coverage depth data.
• Analyzing intra-host viral diversity dynamics in HBV based on gene-level coverage.
• Comparing sequencing coverage patterns across different viral genes.
• Validating error-correction workflows for long-read viral sequencing data.

Strengths

• Dataset is small at 9.2 KB, facilitating quick download and inspection.
• Data is associated with a published methodology (QoALa workflow) benchmarked on multiple viruses.
• License is CC-BY-4.0, allowing for open sharing and reuse.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The dataset's scope is limited to HBV samples, as indicated by the title.

Provenance

Source

figshare, author Nakarin Pamornchainavakul

Collection Method

Likely derived from long-read sequencing of Hepatitis B Virus samples as part of a methodological study.

Freshness

Last updated 2026-04-28 17:35:05; freshness should be verified.