Theoretical Model Results for Host-Plasmid Network Interactions

A 5.5 KB Excel file from figshare contains simulation results from a stochastic agent-based model investigating plasmid transmission. The model, authored by Ying-Jie Wang, embeds host-plasmid infection and plasmid-plasmid compatibility networks to study their non-additive effects on community dynamics. Results highlight how network modularity and hub structures influence host coexistence and plasmid diversity, particularly under moderate fitness costs.

Use Cases

• Analyzing the impact of network structure on plasmid prevalence based on simulated infection and compatibility networks.
• Testing hypotheses about host coexistence and plasmid diversity under varying fitness costs as described in the model.
• Parameterizing mechanistic models of host-plasmid community dynamics with empirical data as referenced in the description.

Strengths

• Model systematically varies infection and compatibility network structures individually and in combination, as described.
• Results are parameterized to recapitulate empirical host-plasmid community dynamics, according to the description.
• Dataset is openly available under a CC-BY-4.0 license.

Limitations

• Dataset is very small at 5.5 KB, indicating limited scope or a summary of model outputs.
• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment for large-scale analysis.

Provenance

Source

figshare, author Ying-Jie Wang.

Collection Method

Output from a stochastic agent-based model simulating coupled host-plasmid dynamics.

Freshness

Last updated 2026-05-26 17:47:02; freshness should be verified.