Genes Involved in Calcium Carbonate Precipitation from Transcriptomic Data

A 13.5 KB dataset lists genes involved in CaCO3 precipitation, indicating their presence or absence in transcriptomic data. It was authored by Anthony M. Bonacolta and last updated on 2026-05-18. The data includes annotations linking present genes to specific Vibrio species based on phylogenetic analysis.

Use Cases

• Identify key genetic markers for biomineralization based on gene presence/absence data.
• Compare gene expression profiles for CaCO3 precipitation across different Vibrio species.
• Validate phylogenetic analyses of Vibrio species based on functional gene annotations.

Strengths

• Dataset is small (13.5 KB), facilitating quick download and inspection.
• Includes specific annotations linking genes to Vibrio species based on phylogenetic analysis.
• Released under the permissive CC-BY-4.0 license.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The description metadata is limited; actual data quality requires manual inspection.

Provenance

Source

figshare

Collection Method

Derived from transcriptomic data and phylogenetic analysis.

Freshness

Last updated 2026-05-18 17:39:58; freshness should be verified.