Neisseria Gonorrhoeae Opa Genes Outside Collinear Blocks

A list of opa genes from Neisseria gonorrhoeae that did not align within locally collinear blocks with the FA1090 reference genome. The dataset was authored by QinQin Yu and last updated on May 11, 2026. It is a small dataset, 9.9 KB in size, shared under a CC-BY-4.0 license.

Use Cases

• Identify divergent or rearranged opa genes based on their exclusion from collinear alignment blocks.
• Analyze genome plasticity and structural variation in Neisseria gonorrhoeae based on the opa gene family.
• Compare gene content and synteny between bacterial strains based on the set of non-aligned genes.

Strengths

• Dataset is small (9.9 KB), facilitating quick download and inspection.
• License is permissive (CC-BY-4.0), allowing for broad reuse.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.

Provenance

Source

QinQin Yu via figshare.

Collection Method

Likely derived from comparative genomic analysis against the FA1090 reference genome.

Freshness

Last updated 2026-05-11 17:47:07; freshness should be verified.