Avian Pathogenic E. coli Strains and Plasmids List

A list of strains and plasmids associated with avian pathogenic Escherichia coli (APEC) research. The dataset was created by Fariba Akrami and last updated in April 2026. It focuses on the QT598 strain and its ColV plasmid encoding P-like fimbriae.

Use Cases

• Analyze strain identifiers to catalog APEC variants for comparative genomics.
• Map plasmid names like ColV to associated fimbrial operons such as plf.
• Correlate strain data with experimental findings on tissue-specific adherence from turkey lung sections.
• Use glycan array results like Lewis b antigen recognition to predict receptor specificity across strains.
• Compare structural features like β-sandwich folds between Plf adhesin variants and other fimbrial adhesins.

Strengths

• Dataset is openly licensed under CC-BY-4.0.
• Focuses on a specific, well-characterized APEC strain (QT598) and plasmid (ColV).

Limitations

• Dataset is very small at 9.5 KB, indicating limited scope.
• No row count or column details are provided, obscuring data structure.
• Data appears to be a static list without temporal or geographic coverage.

Provenance

Source

Research by Fariba Akrami, published on figshare.

Collection Method

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Time Range

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Freshness

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Geography

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